BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E02SP1|AL429402
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1410 1620 0.0
>3x_Contig1410
Length = 7640
Score = 1620 bits (814), Expect = 0.0
Identities = 847/857 (98%), Gaps = 3/857 (0%)
Strand = Plus / Plus
Query: 1 atcatgtgatagcgggccacgagactactggtatcaccttgacttacatatgttgggaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3270 atcatgtgatagcgggccacgagactactggtatcaccttgacttacatatgttgggaac 3329
Query: 61 tttcaagaccttgtaacagacactggcaagataaactgtttgaagagtgtaaaacagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3330 tttcaagaccttgtaacagacactggcaagataaactgtttgaagagtgtaaaacagtac 3389
Query: 121 catcggatttacaacgtttagaccaaatgccgattcttcacagtattgtccaagaggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3390 catcggatttacaacgtttagaccaaatgccgattcttcacagtattgtccaagaggcat 3449
Query: 181 gtagactccattcggcgatcccgggcagcgagcccagatacgtcccacaagaggggccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3450 gtagactccattcggcgatcccgggcagcgagcccagatacgtcccacaagaggggccca 3509
Query: 241 aattcgaagctacactaagggataaacacggaacccgtgtagaaattccaccggggacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3510 aattcgaagctacactaagggataaacacggaacccgtgtagaaattccaccggggacca 3569
Query: 301 tagtatcatgccaaccatggtcgttacacctactagaaacaccattcggtgccaatccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3570 tagtatcatgccaaccatggtcgttacacctactagaaacaccattcggtgccaatccaa 3629
Query: 361 gacaattcaatccggcaagatggttaagggacgaaacaacaggggaaaccgaacaagagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3630 gacaattcaatccggcaagatggttaagggacgaaacaacaggggaaaccgaacaagagt 3689
Query: 421 acgagaaaaggttaacgaaaatgaacaattccatgttcactttcggacaaggaaacagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3690 acgagaaaaggttaacgaaaatgaacaattccatgttcactttcggacaaggaaacagaa 3749
Query: 481 tgtgtyttggcatgaaccttgcattgatggagatgaaatactgcatagcacakctgtatt 540
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3750 tgtgtcttggcatgaaccttgcattgatggagatgaaatactgcatagcacagctgtatt 3809
Query: 541 caaggtacaccactgatatttctcccgaatggtgcaacaaggtgtaccagcaacagacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3810 caaggtacaccactgatatttctcccgaatggtgcaacaaggtgtaccagcaacagacag 3869
Query: 601 attcgttgatggggacaagtggacgtggcagag-cac-tcamtncaaaaggaacggacgt 658
||||||||||||||||||||||||||||||||| ||| ||| | | ||||||||||||||
Sbjct: 3870 attcgttgatggggacaagtggacgtggcagagccacgtcatttc-aaaggaacggacgt 3928
Query: 659 cgacatgatgakaatggcagacacctacactacaagacccttaatgaacgaatgctggct 718
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3929 cgacatgatgagaatggcagacacctacactacaagacccttaatgaacgaatgctggct 3988
Query: 719 tgaattttcatcacgtgacttatatgcacgacccatatcggctgcaatttcctaatacgg 778
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3989 tgaattttcatcacgtgactaatatgcacgacccatatcggctgcaatttcctaatacgg 4048
Query: 779 agaaataccccgcgcttatcaccagaaatcctcctcactataaaagccgaaactgcatcg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4049 agaaataccccgcgcttatcaccagaaatcctcctcactataaaagccgaaactgcatcg 4108
Query: 839 gaaaccttcacagawaa 855
|||||||||||||| ||
Sbjct: 4109 gaaaccttcacagaaaa 4125
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4340
Number of Sequences: 1807
Number of extensions: 4340
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)